Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05444682_103270 | Not Available | Negative | 2014490 - 2015638 | 42821.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_103271 | Not Available | Negative | 2015706 - 2016290 | 22753.4 |
| hypothetical protein | SAMN05444682_103272 | Not Available | Positive | 2016368 - 2016502 | 5187.24 |
| hlyd family secretion protein | SAMN05444682_103273 | Not Available | Positive | 2016618 - 2017871 | 47023.8 |
| ftsx-like permease family protein | SAMN05444682_103274 | Not Available | Positive | 2017896 - 2020247 | 87559.7 |
| macb-like core domain-containing protein | SAMN05444682_103275 | Not Available | Positive | 2020296 - 2022671 | 88113.1 |
| macb-like core domain-containing protein | SAMN05444682_103276 | Not Available | Positive | 2022682 - 2023251 | 21191.2 |
| ftsx-like permease family protein | SAMN05444682_103277 | Not Available | Positive | 2023242 - 2024012 | 28281.7 |
| transcriptional regulator, gntr family | SAMN05444682_103278 | Not Available | Positive | 2024175 - 2024810 | 24245.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103279 | Not Available | Positive | 2025143 - 2028334 | 115109.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
