Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/proline symporter | SAMN05444682_103250 | Not Available | Negative | 1977165 - 1978631 | 54636.8 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05444682_103251 | Not Available | Negative | 1978651 - 1979466 | 29060.9 |
| hypothetical protein | SAMN05444682_103252 | Not Available | Negative | 1979721 - 1982012 | 85896.5 |
| beta-galactosidase | SAMN05444682_103253 | Not Available | Negative | 1982021 - 1984003 | 74695.6 |
| starch-binding associating with outer membrane | SAMN05444682_103254 | Not Available | Negative | 1984006 - 1985706 | 63798.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103255 | Not Available | Negative | 1985725 - 1988739 | 110381.0 |
| hypothetical protein | SAMN05444682_103256 | Not Available | Positive | 1988766 - 1988936 | 6417.92 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103257 | Not Available | Positive | 1989737 - 1992937 | 119014.0 |
| starch-binding associating with outer membrane | SAMN05444682_103258 | Not Available | Positive | 1992982 - 1994874 | 71670.1 |
| hypothetical protein | SAMN05444682_103259 | Not Available | Positive | 1994902 - 1995420 | 19174.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
