Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_103230 | Not Available | Positive | 1951526 - 1951651 | 4872.05 |
| hypothetical protein | SAMN05444682_103231 | Not Available | Negative | 1951682 - 1952464 | 28698.4 |
| sensor domain chase2-containing protein | SAMN05444682_103232 | Not Available | Negative | 1952440 - 1953609 | 44174.5 |
| transcriptional regulator, arac family | SAMN05444682_103233 | Not Available | Negative | 1953709 - 1954578 | 33358.1 |
| glucosamine-6-phosphate deaminase | SAMN05444682_103234 | Not Available | Negative | 1954712 - 1956670 | 74211.1 |
| predicted dehydrogenase | SAMN05444682_103235 | Not Available | Positive | 1956867 - 1958264 | 51560.0 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | SAMN05444682_103236 | Not Available | Negative | 1958251 - 1959405 | 43217.8 |
| helix-turn-helix | SAMN05444682_103237 | Not Available | Negative | 1959426 - 1959776 | 13437.1 |
| hypothetical protein | SAMN05444682_103238 | Not Available | Positive | 1959808 - 1959984 | 6604.99 |
| hypothetical protein | SAMN05444682_103239 | Not Available | Negative | 1959956 - 1960171 | 7907.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
