Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103220 | Not Available | Positive | 1934749 - 1938123 | 122755.0 |
| starch-binding associating with outer membrane | SAMN05444682_103221 | Not Available | Positive | 1938136 - 1939656 | 55724.7 |
| arylsulfatase a | SAMN05444682_103222 | Not Available | Positive | 1939656 - 1941086 | 53565.6 |
| arylsulfatase a | SAMN05444682_103223 | Not Available | Positive | 1941076 - 1942581 | 57768.5 |
| hypothetical protein | SAMN05444682_103224 | Not Available | Positive | 1942568 - 1942855 | 10594.0 |
| hypothetical protein | SAMN05444682_103225 | Not Available | Negative | 1942958 - 1944070 | 40962.4 |
| putative membrane protein | SAMN05444682_103226 | Not Available | Positive | 1944186 - 1944545 | 12929.4 |
| hypothetical protein | SAMN05444682_103227 | Not Available | Positive | 1944637 - 1946049 | 51459.8 |
| caspase domain-containing protein | SAMN05444682_103228 | Not Available | Positive | 1946059 - 1948029 | 72260.0 |
| caspase domain-containing protein | SAMN05444682_103229 | Not Available | Positive | 1948033 - 1951587 | 134266.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
