Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103210 | Not Available | Positive | 1919676 - 1923041 | 123150.0 |
| starch-binding associating with outer membrane | SAMN05444682_103211 | Not Available | Positive | 1923045 - 1924697 | 62175.8 |
| arylsulfatase a | SAMN05444682_103212 | Not Available | Positive | 1924684 - 1926090 | 53341.9 |
| prenyltransferase and squalene oxidase repeat-containing protein | SAMN05444682_103213 | Not Available | Positive | 1926065 - 1927867 | 67572.1 |
| arylsulfatase a | SAMN05444682_103214 | Not Available | Positive | 1927907 - 1929451 | 56544.0 |
| predicted dehydrogenase | SAMN05444682_103215 | Not Available | Negative | 1929512 - 1930774 | 47238.4 |
| sugar phosphate isomerase/epimerase | SAMN05444682_103216 | Not Available | Negative | 1930779 - 1931708 | 35369.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444682_103217 | Not Available | Negative | 1931719 - 1932654 | 34637.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN05444682_103218 | Not Available | Positive | 1932979 - 1933551 | 22912.3 |
| fecr family protein | SAMN05444682_103219 | Not Available | Positive | 1933600 - 1934682 | 40623.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
