Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_103200 | Not Available | Positive | 1904713 - 1904820 | 3757.67 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_103201 | Not Available | Positive | 1904796 - 1905401 | 23371.6 |
| fecr family protein | SAMN05444682_103202 | Not Available | Positive | 1905500 - 1906741 | 45835.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103203 | Not Available | Positive | 1906912 - 1910244 | 122743.0 |
| starch-binding associating with outer membrane | SAMN05444682_103204 | Not Available | Positive | 1910256 - 1911938 | 63383.4 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN05444682_103205 | Not Available | Positive | 1911973 - 1913238 | 48441.4 |
| fad dependent oxidoreductase | SAMN05444682_103206 | Not Available | Positive | 1913250 - 1916399 | 114717.0 |
| hypothetical protein | SAMN05444682_103207 | Not Available | Positive | 1916401 - 1917489 | 40793.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_103208 | Not Available | Positive | 1917482 - 1918132 | 25222.8 |
| fecr family protein | SAMN05444682_103209 | Not Available | Positive | 1918203 - 1919459 | 47016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
