Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacid dehydratase | SAMN05444682_103170 | Not Available | Positive | 1863014 - 1864711 | 59878.1 |
| acetolactate synthase, large subunit | SAMN05444682_103171 | Not Available | Positive | 1864790 - 1866529 | 63427.6 |
| acetolactate synthase, small subunit | SAMN05444682_103172 | Not Available | Positive | 1866539 - 1867129 | 22837.2 |
| dinb superfamily protein | SAMN05444682_103173 | Not Available | Positive | 1867148 - 1867636 | 18476.0 |
| ketol-acid reductoisomerase | SAMN05444682_103174 | Not Available | Positive | 1867641 - 1869122 | 54166.3 |
| molybdate transport system atp-binding protein | SAMN05444682_103175 | Not Available | Positive | 1869247 - 1870713 | 55662.6 |
| 2-isopropylmalate synthase | SAMN05444682_103176 | Not Available | Positive | 1870759 - 1872288 | 56026.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444682_103177 | Not Available | Positive | 1872335 - 1873732 | 50417.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05444682_103178 | Not Available | Positive | 1873737 - 1874333 | 22298.3 |
| d-citramalate synthase | SAMN05444682_103179 | Not Available | Positive | 1874336 - 1875904 | 57791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
