Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase (cytochrome) | SAMN05444682_103160 | Not Available | Negative | 1850622 - 1851782 | 42869.3 |
| sugar (pentulose or hexulose) kinase | SAMN05444682_103161 | Not Available | Negative | 1851801 - 1853165 | 51230.9 |
| l-rhamnose isomerase / sugar isomerase | SAMN05444682_103162 | Not Available | Negative | 1853165 - 1854439 | 47305.1 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN05444682_103163 | Not Available | Negative | 1854632 - 1856758 | 76788.8 |
| l-rhamnose-h+ transport protein | SAMN05444682_103164 | Not Available | Negative | 1856810 - 1857892 | 39102.1 |
| hypothetical protein | SAMN05444682_103165 | Not Available | Positive | 1858085 - 1858693 | 22980.5 |
| peroxiredoxin | SAMN05444682_103166 | Not Available | Positive | 1858727 - 1859845 | 42172.2 |
| atp synthase f1 subcomplex beta subunit | SAMN05444682_103167 | Not Available | Positive | 1859972 - 1861474 | 54475.5 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05444682_103168 | Not Available | Positive | 1861476 - 1861727 | 8854.71 |
| branched-chain amino acid aminotransferase | SAMN05444682_103169 | Not Available | Positive | 1862121 - 1863011 | 33152.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
