Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter protein lptc | SAMN05444682_103150 | Not Available | Positive | 1839004 - 1839591 | 22073.0 |
| peptidyl-prolyl cis-trans isomerase d | SAMN05444682_103151 | Not Available | Positive | 1839741 - 1841852 | 77165.1 |
| protein of unknown function | SAMN05444682_103152 | Not Available | Positive | 1841925 - 1842440 | 19552.6 |
| protein of unknown function | SAMN05444682_103153 | Not Available | Positive | 1842444 - 1843235 | 30012.9 |
| protein of unknown function | SAMN05444682_103154 | Not Available | Positive | 1843248 - 1843811 | 21288.5 |
| octaprenyl-diphosphate synthase | SAMN05444682_103155 | Not Available | Positive | 1843855 - 1844826 | 36388.1 |
| tellurite resistance protein terc | SAMN05444682_103156 | Not Available | Positive | 1844828 - 1845877 | 39785.5 |
| hypothetical protein | SAMN05444682_103157 | Not Available | Negative | 1845882 - 1846166 | 10630.7 |
| prolyl oligopeptidase serine peptidase. merops family s09a | SAMN05444682_103158 | Not Available | Negative | 1846178 - 1848328 | 79421.1 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | SAMN05444682_103159 | Not Available | Negative | 1848993 - 1850447 | 53207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
