Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444682_103140 | Not Available | Negative | 1826689 - 1827543 | 31237.7 |
| starch-binding associating with outer membrane | SAMN05444682_103141 | Not Available | Negative | 1827610 - 1829298 | 64310.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103142 | Not Available | Negative | 1829310 - 1832690 | 124846.0 |
| fecr family protein | SAMN05444682_103143 | Not Available | Negative | 1832786 - 1833832 | 39304.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN05444682_103144 | Not Available | Negative | 1833946 - 1834545 | 23907.9 |
| hypothetical protein | SAMN05444682_103145 | Not Available | Negative | 1834566 - 1834778 | 8278.38 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05444682_103146 | Not Available | Positive | 1834875 - 1835732 | 32857.9 |
| hypothetical protein | SAMN05444682_103147 | Not Available | Positive | 1835849 - 1836829 | 38310.6 |
| phosphoribosylformylglycinamidine synthase subunit i | SAMN05444682_103148 | Not Available | Positive | 1836934 - 1837635 | 25518.6 |
| hypothetical protein | SAMN05444682_103149 | Not Available | Positive | 1837644 - 1838981 | 48898.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
