Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05444682_103120 | Not Available | Negative | 1801704 - 1803011 | 47960.3 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444682_103121 | Not Available | Negative | 1803017 - 1804006 | 36777.3 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN05444682_103122 | Not Available | Negative | 1804013 - 1804399 | 13841.5 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | SAMN05444682_103123 | Not Available | Negative | 1804547 - 1805275 | 26729.1 |
| gluconate 5-dehydrogenase | SAMN05444682_103124 | Not Available | Negative | 1805322 - 1806068 | 27125.7 |
| glucarate dehydratase | SAMN05444682_103125 | Not Available | Negative | 1806086 - 1807276 | 44143.2 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05444682_103126 | Not Available | Negative | 1807308 - 1808195 | 32043.2 |
| transcriptional regulator, iclr family | SAMN05444682_103127 | Not Available | Negative | 1808215 - 1808949 | 27382.2 |
| sugar phosphate permease | SAMN05444682_103128 | Not Available | Negative | 1809001 - 1810233 | 45352.1 |
| hypothetical protein | SAMN05444682_103129 | Not Available | Negative | 1810258 - 1810401 | 5543.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
