Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_103110 | Not Available | Negative | 1787606 - 1789069 | 55331.7 |
| susd family protein | SAMN05444682_103111 | Not Available | Negative | 1789123 - 1790595 | 55887.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103112 | Not Available | Negative | 1790611 - 1793823 | 117598.0 |
| hypothetical protein | SAMN05444682_103113 | Not Available | Negative | 1794101 - 1795600 | 56260.3 |
| hypothetical protein | SAMN05444682_103114 | Not Available | Positive | 1795853 - 1796050 | 7857.68 |
| glycosyl hydrolases family 43 | SAMN05444682_103115 | Not Available | Negative | 1796107 - 1797123 | 38630.8 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN05444682_103116 | Not Available | Negative | 1797162 - 1798271 | 41118.8 |
| hypothetical protein | SAMN05444682_103117 | Not Available | Negative | 1798287 - 1799648 | 50401.0 |
| membrane dipeptidase | SAMN05444682_103118 | Not Available | Negative | 1799657 - 1800739 | 40850.6 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05444682_103119 | Not Available | Negative | 1800812 - 1801696 | 33238.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
