Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN05444682_103100 | Not Available | Negative | 1778571 - 1779461 | 34488.0 |
| hypothetical protein | SAMN05444682_103101 | Not Available | Positive | 1779546 - 1780499 | 35603.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_103102 | Not Available | Negative | 1780496 - 1781272 | 28125.9 |
| predicted dehydrogenase | SAMN05444682_103103 | Not Available | Negative | 1781282 - 1782202 | 34355.4 |
| predicted oxidoreductase | SAMN05444682_103104 | Not Available | Negative | 1782199 - 1783152 | 35445.7 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05444682_103105 | Not Available | Negative | 1783163 - 1783957 | 29084.6 |
| sugar phosphate permease | SAMN05444682_103106 | Not Available | Negative | 1783972 - 1785207 | 45655.6 |
| hypothetical protein | SAMN05444682_103107 | Not Available | Negative | 1785197 - 1785526 | 12339.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_103108 | Not Available | Negative | 1785517 - 1786296 | 27960.8 |
| bnr repeat-like domain-containing protein | SAMN05444682_103109 | Not Available | Negative | 1786319 - 1787494 | 43776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
