Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05444682_10390 | Not Available | Negative | 1766270 - 1767280 | 37379.6 |
| beta-glucosidase | SAMN05444682_10391 | Not Available | Negative | 1767297 - 1769816 | 93893.2 |
| tolb amino-terminal domain-containing protein | SAMN05444682_10392 | Not Available | Negative | 1769931 - 1771991 | 78945.9 |
| ankyrin repeat-containing protein | SAMN05444682_10393 | Not Available | Positive | 1772198 - 1772749 | 19591.4 |
| acyltransferase family protein | SAMN05444682_10394 | Not Available | Positive | 1772775 - 1773821 | 41026.6 |
| arac-type dna-binding protein | SAMN05444682_10395 | Not Available | Positive | 1773956 - 1774831 | 33768.5 |
| phytanoyl-coa hydroxylase | SAMN05444682_10396 | Not Available | Positive | 1774930 - 1775676 | 28251.8 |
| membrane dipeptidase | SAMN05444682_10397 | Not Available | Negative | 1775682 - 1776758 | 39984.4 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05444682_10398 | Not Available | Negative | 1776749 - 1777744 | 37627.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444682_10399 | Not Available | Negative | 1777758 - 1778504 | 26811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
