Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane cobalamin receptor protein | SAMN05444682_10380 | Not Available | Negative | 1754805 - 1756814 | 74269.4 |
| two component transcriptional regulator, lyttr family | SAMN05444682_10381 | Not Available | Negative | 1756928 - 1757644 | 27538.5 |
| histidine kinase | SAMN05444682_10382 | Not Available | Negative | 1757641 - 1758666 | 39140.0 |
| uncharacterized iron-regulated membrane protein | SAMN05444682_10383 | Not Available | Negative | 1758943 - 1760124 | 43812.6 |
| iron complex outermembrane recepter protein | SAMN05444682_10384 | Not Available | Negative | 1760128 - 1762545 | 88798.7 |
| protein of unknown function | SAMN05444682_10385 | Not Available | Positive | 1763045 - 1763296 | 8879.94 |
| gluconolactonase | SAMN05444682_10386 | Not Available | Positive | 1763332 - 1764303 | 35297.3 |
| response regulator receiver domain-containing protein | SAMN05444682_10387 | Not Available | Positive | 1764514 - 1764912 | 15065.5 |
| hypothetical protein | SAMN05444682_10388 | Not Available | Positive | 1764923 - 1765264 | 12844.8 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444682_10389 | Not Available | Positive | 1765285 - 1766322 | 37462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
