Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_10370 | Not Available | Negative | 1744950 - 1746692 | 66068.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10371 | Not Available | Negative | 1746728 - 1749970 | 121419.0 |
| gyri-like small molecule binding domain-containing protein | SAMN05444682_10372 | Not Available | Positive | 1750431 - 1750661 | 8801.73 |
| apolipoprotein d and lipocalin family protein | SAMN05444682_10373 | Not Available | Positive | 1750699 - 1751253 | 21019.2 |
| membrane-associated protein | SAMN05444682_10374 | Not Available | Negative | 1751228 - 1751821 | 21577.3 |
| hypothetical protein | SAMN05444682_10375 | Not Available | Negative | 1751896 - 1752612 | 25611.2 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05444682_10376 | Not Available | Positive | 1752711 - 1753214 | 18986.6 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN05444682_10377 | Not Available | Positive | 1753240 - 1753824 | 22696.6 |
| hypothetical protein | SAMN05444682_10378 | Not Available | Negative | 1753876 - 1754118 | 9010.45 |
| hypothetical protein | SAMN05444682_10379 | Not Available | Negative | 1754139 - 1754777 | 23662.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
