Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/galactose transporter | SAMN05444682_10360 | Not Available | Positive | 1730440 - 1731705 | 45893.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10361 | Not Available | Positive | 1731841 - 1735050 | 119254.0 |
| starch-binding associating with outer membrane | SAMN05444682_10362 | Not Available | Positive | 1735061 - 1736800 | 65904.8 |
| methane oxygenase pmoa | SAMN05444682_10363 | Not Available | Positive | 1736835 - 1737881 | 39663.6 |
| predicted dehydrogenase | SAMN05444682_10364 | Not Available | Positive | 1737919 - 1739292 | 50917.9 |
| predicted dehydrogenase | SAMN05444682_10365 | Not Available | Positive | 1739304 - 1740302 | 36372.4 |
| arac-type dna-binding protein | SAMN05444682_10366 | Not Available | Positive | 1740468 - 1741361 | 34548.7 |
| sugar phosphate isomerase/epimerase | SAMN05444682_10367 | Not Available | Negative | 1741562 - 1742521 | 35008.1 |
| predicted dehydrogenase | SAMN05444682_10368 | Not Available | Negative | 1742535 - 1743896 | 51405.8 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN05444682_10369 | Not Available | Positive | 1744245 - 1744823 | 22421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
