Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10350 | Not Available | Positive | 1722303 - 1723226 | 34931.9 |
| glutamate 5-kinase | SAMN05444682_10351 | Not Available | Positive | 1723344 - 1724378 | 37310.6 |
| glutamate-5-semialdehyde dehydrogenase | SAMN05444682_10352 | Not Available | Positive | 1724388 - 1725635 | 45527.6 |
| sugar phosphate permease | SAMN05444682_10353 | Not Available | Positive | 1725878 - 1727188 | 48756.6 |
| ph domain-containing protein | SAMN05444682_10354 | Not Available | Positive | 1727252 - 1727689 | 16258.6 |
| predicted o-methyltransferase yrrm | SAMN05444682_10355 | Not Available | Positive | 1727719 - 1728297 | 21562.8 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444682_10356 | Not Available | Positive | 1728481 - 1728930 | 16540.0 |
| hypothetical protein | SAMN05444682_10357 | Not Available | Positive | 1729048 - 1729149 | 3646.35 |
| coa-transferase family iii | SAMN05444682_10358 | Not Available | Negative | 1729132 - 1729446 | 11535.9 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05444682_10359 | Not Available | Positive | 1729659 - 1730432 | 29096.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
