Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rifampin adp-ribosylating transferase | SAMN05444682_10340 | Not Available | Negative | 1709290 - 1710033 | 27253.0 |
| hypothetical protein | SAMN05444682_10341 | Not Available | Positive | 1710397 - 1711953 | 57298.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10342 | Not Available | Negative | 1712127 - 1712714 | 22788.8 |
| hypothetical protein | SAMN05444682_10343 | Not Available | Negative | 1712833 - 1713681 | 32486.9 |
| starch-binding associating with outer membrane | SAMN05444682_10344 | Not Available | Negative | 1713759 - 1715303 | 58098.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10345 | Not Available | Negative | 1715324 - 1718356 | 111374.0 |
| hypothetical protein | SAMN05444682_10346 | Not Available | Positive | 1718482 - 1718955 | 18720.5 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05444682_10347 | Not Available | Negative | 1719288 - 1719953 | 25468.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444682_10348 | Not Available | Negative | 1719965 - 1721647 | 64109.6 |
| hypothetical protein | SAMN05444682_10349 | Not Available | Negative | 1721734 - 1721886 | 5256.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
