Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted protein | SAMN05444682_10330 | Not Available | Positive | 1700730 - 1701635 | 33119.0 |
| hypothetical protein | SAMN05444682_10331 | Not Available | Negative | 1701560 - 1701799 | 8918.73 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05444682_10332 | Not Available | Negative | 1701787 - 1702662 | 33920.9 |
| hypothetical protein | SAMN05444682_10333 | Not Available | Negative | 1702668 - 1703552 | 32166.7 |
| two component transcriptional regulator, lyttr family | SAMN05444682_10334 | Not Available | Negative | 1703719 - 1704474 | 29288.3 |
| histidine kinase | SAMN05444682_10335 | Not Available | Negative | 1704471 - 1705478 | 38487.7 |
| ribosome biogenesis gtpase | SAMN05444682_10336 | Not Available | Negative | 1705694 - 1706749 | 39724.5 |
| hypothetical protein | SAMN05444682_10337 | Not Available | Positive | 1707087 - 1707332 | 9643.69 |
| protein of unknown function | SAMN05444682_10338 | Not Available | Negative | 1707270 - 1707923 | 24515.7 |
| hypothetical protein | SAMN05444682_10339 | Not Available | Positive | 1708023 - 1709297 | 47399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
