Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10320 | Not Available | Negative | 1687550 - 1687762 | 7964.5 |
| patatin-like phospholipase | SAMN05444682_10321 | Not Available | Positive | 1687834 - 1689681 | 70872.6 |
| doxx-like family protein | SAMN05444682_10322 | Not Available | Negative | 1689772 - 1690200 | 15542.3 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444682_10323 | Not Available | Positive | 1690606 - 1691676 | 40087.7 |
| proline iminopeptidase | SAMN05444682_10324 | Not Available | Positive | 1691713 - 1692624 | 34015.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10325 | Not Available | Positive | 1693158 - 1693742 | 22303.7 |
| exopolysaccharide biosynthesis protein | SAMN05444682_10326 | Not Available | Positive | 1693813 - 1694685 | 32401.1 |
| fecr family protein | SAMN05444682_10327 | Not Available | Positive | 1694708 - 1695859 | 42840.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10328 | Not Available | Positive | 1696111 - 1699410 | 121131.0 |
| susd family protein | SAMN05444682_10329 | Not Available | Positive | 1699429 - 1700709 | 48281.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
