Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10310 | Not Available | Positive | 1681936 - 1682046 | 4314.33 |
| hypothetical protein | SAMN05444682_10311 | Not Available | Positive | 1682033 - 1682602 | 22194.9 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444682_10312 | Not Available | Positive | 1682602 - 1682871 | 10319.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444682_10313 | Not Available | Positive | 1682819 - 1683160 | 12262.7 |
| hypothetical protein | SAMN05444682_10314 | Not Available | Positive | 1683460 - 1683705 | 9265.22 |
| putative toxin-antitoxin system toxin component, pin family | SAMN05444682_10315 | Not Available | Positive | 1683692 - 1684102 | 15487.9 |
| pria4b orf-3-like protein | SAMN05444682_10316 | Not Available | Negative | 1684199 - 1684783 | 22606.8 |
| hypothetical protein | SAMN05444682_10317 | Not Available | Negative | 1684929 - 1685561 | 24818.6 |
| hypothetical protein | SAMN05444682_10318 | Not Available | Negative | 1685651 - 1686919 | 48609.5 |
| hypothetical protein | SAMN05444682_10319 | Not Available | Positive | 1687158 - 1687484 | 12485.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
