Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101127 | Not Available | Positive | 149854 - 150255 | 15067.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN05444682_101128 | Not Available | Positive | 150355 - 150930 | 20884.8 |
| helix-turn-helix domain-containing protein | SAMN05444682_101129 | Not Available | Positive | 151124 - 152707 | 60931.8 |
| arac-type dna-binding protein | SAMN05444682_101130 | Not Available | Positive | 152867 - 153970 | 41719.3 |
| helix-turn-helix domain-containing protein | SAMN05444682_101131 | Not Available | Positive | 154054 - 155082 | 38818.3 |
| hypothetical protein | SAMN05444682_101132 | Not Available | Negative | 155141 - 155278 | 5261.35 |
| hypothetical protein | SAMN05444682_101133 | Not Available | Negative | 155260 - 155430 | 6571.92 |
| hypothetical protein | SAMN05444682_101134 | Not Available | Positive | 155494 - 155697 | 7611.75 |
| hypothetical protein | SAMN05444682_101135 | Not Available | Positive | 156211 - 156861 | 24285.2 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN05444682_101136 | Not Available | Positive | 156875 - 164575 | 265996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
