Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-xylulokinase | SAMN05444682_102582 | Not Available | Negative | 1629390 - 1630892 | 53787.5 |
| alcohol dehydrogenase, class iv | SAMN05444682_102583 | Not Available | Negative | 1630910 - 1632088 | 41427.2 |
| methylmalonate-semialdehyde dehydrogenase | SAMN05444682_102584 | Not Available | Negative | 1632088 - 1633587 | 53830.6 |
| fructose-bisphosphate aldolase class ia, dhna family | SAMN05444682_102585 | Not Available | Negative | 1633571 - 1634428 | 31734.1 |
| glycerol-3-phosphate dehydrogenase | SAMN05444682_102586 | Not Available | Negative | 1634431 - 1636131 | 63095.3 |
| right handed beta helix region | SAMN05444682_102587 | Not Available | Negative | 1636142 - 1637953 | 67191.5 |
| solute:na+ symporter, sss family | SAMN05444682_102588 | Not Available | Negative | 1637971 - 1639524 | 58012.0 |
| fad dependent oxidoreductase | SAMN05444682_102589 | Not Available | Negative | 1639517 - 1641004 | 54143.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444682_102590 | Not Available | Negative | 1641011 - 1641739 | 25767.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444682_102591 | Not Available | Negative | 1641779 - 1642540 | 27094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
