Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_102552 | Not Available | Negative | 1592871 - 1593719 | 31321.9 |
| inner membrane protein | SAMN05444682_102553 | Not Available | Negative | 1593855 - 1595318 | 54349.1 |
| winged helix dna-binding domain-containing protein | SAMN05444682_102554 | Not Available | Negative | 1595371 - 1595664 | 11101.5 |
| hypothetical protein | SAMN05444682_102555 | Not Available | Negative | 1595664 - 1596293 | 22484.2 |
| hypothetical protein | SAMN05444682_102556 | Not Available | Positive | 1596374 - 1597684 | 48825.4 |
| hypothetical protein | SAMN05444682_102557 | Not Available | Negative | 1597823 - 1597918 | 3600.39 |
| hypothetical protein | SAMN05444682_102558 | Not Available | Positive | 1598065 - 1598619 | 20621.5 |
| arylsulfatase a | SAMN05444682_102559 | Not Available | Negative | 1598690 - 1600057 | 51023.3 |
| starch-binding associating with outer membrane | SAMN05444682_102560 | Not Available | Negative | 1600069 - 1601502 | 53430.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102561 | Not Available | Negative | 1601514 - 1605050 | 130022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
