Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuconolactonase | SAMN05444682_102542 | Not Available | Negative | 1582295 - 1583131 | 31770.7 |
| altronate hydrolase | SAMN05444682_102543 | Not Available | Negative | 1583143 - 1584360 | 42663.3 |
| saf domain-containing protein | SAMN05444682_102544 | Not Available | Negative | 1584341 - 1584637 | 10709.0 |
| glucose/galactose transporter | SAMN05444682_102545 | Not Available | Negative | 1584630 - 1585874 | 43701.3 |
| creatinine amidohydrolase | SAMN05444682_102546 | Not Available | Negative | 1585864 - 1586616 | 28200.6 |
| hypothetical protein | SAMN05444682_102547 | Not Available | Negative | 1586642 - 1588975 | 87918.1 |
| hypothetical protein | SAMN05444682_102548 | Not Available | Positive | 1588990 - 1589145 | 5665.07 |
| arac-type dna-binding protein | SAMN05444682_102549 | Not Available | Positive | 1589156 - 1590100 | 36621.3 |
| mfs transporter, fhs family, l-fucose permease | SAMN05444682_102550 | Not Available | Negative | 1590097 - 1591509 | 50439.0 |
| uncharacterized membrane protein | SAMN05444682_102551 | Not Available | Negative | 1591682 - 1592827 | 43055.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
