Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_102522 | Not Available | Negative | 1557355 - 1558380 | 38148.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05444682_102523 | Not Available | Negative | 1558969 - 1560270 | 48328.9 |
| predicted arabinose efflux permease, mfs family | SAMN05444682_102524 | Not Available | Negative | 1560299 - 1561537 | 45598.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_102525 | Not Available | Negative | 1561557 - 1562354 | 28753.2 |
| predicted oxidoreductase | SAMN05444682_102526 | Not Available | Negative | 1562373 - 1563287 | 33645.7 |
| hypothetical protein | SAMN05444682_102527 | Not Available | Negative | 1563284 - 1564387 | 40022.8 |
| gluconolactonase | SAMN05444682_102528 | Not Available | Negative | 1564371 - 1565225 | 30968.1 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05444682_102529 | Not Available | Negative | 1565227 - 1566693 | 53272.2 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN05444682_102530 | Not Available | Negative | 1566696 - 1567079 | 13858.5 |
| n-acetylneuraminate lyase | SAMN05444682_102531 | Not Available | Negative | 1567112 - 1568002 | 32489.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
