Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_102512 | Not Available | Negative | 1542681 - 1543439 | 27904.6 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444682_102513 | Not Available | Negative | 1543446 - 1544759 | 47543.6 |
| protein of unknown function | SAMN05444682_102514 | Not Available | Negative | 1544926 - 1545741 | 30151.4 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_102515 | Not Available | Negative | 1545758 - 1548670 | 105945.0 |
| hypothetical protein | SAMN05444682_102516 | Not Available | Negative | 1548682 - 1550130 | 52604.0 |
| neutral/alkaline non-lysosomal ceramidase, n-terminal | SAMN05444682_102517 | Not Available | Negative | 1550231 - 1551715 | 54154.8 |
| hypothetical protein | SAMN05444682_102518 | Not Available | Negative | 1551735 - 1552280 | 19439.0 |
| hypothetical protein | SAMN05444682_102519 | Not Available | Negative | 1552385 - 1554775 | 90998.0 |
| hypothetical protein | SAMN05444682_102520 | Not Available | Negative | 1554807 - 1556363 | 56278.5 |
| transcriptional regulator, gntr family | SAMN05444682_102521 | Not Available | Positive | 1556620 - 1557336 | 27170.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
