Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam/cys-rich domain-containing protein | SAMN05444682_101117 | Not Available | Positive | 141641 - 142690 | 39498.4 |
| hypothetical protein | SAMN05444682_101118 | Not Available | Positive | 142705 - 143310 | 22257.8 |
| transferase 2, rsam/selenodomain-associated | SAMN05444682_101119 | Not Available | Positive | 143303 - 144007 | 26783.1 |
| nadph-dependent fmn reductase | SAMN05444682_101120 | Not Available | Positive | 144032 - 145105 | 41107.7 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444682_101121 | Not Available | Positive | 145098 - 145958 | 33029.8 |
| beta-lactamase class a/beta-lactamase class a veb | SAMN05444682_101122 | Not Available | Positive | 146100 - 147008 | 33414.7 |
| hypothetical protein | SAMN05444682_101123 | Not Available | Negative | 146990 - 147847 | 33193.5 |
| putative intracellular protease/amidase | SAMN05444682_101124 | Not Available | Positive | 148053 - 148742 | 24847.3 |
| transcriptional regulator, iclr family | SAMN05444682_101125 | Not Available | Negative | 148810 - 149514 | 26372.7 |
| hypothetical protein | SAMN05444682_101126 | Not Available | Positive | 149521 - 149706 | 6375.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
