Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05444682_102502 | Not Available | Negative | 1533404 - 1534258 | 32400.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_102503 | Not Available | Negative | 1534272 - 1535042 | 26814.2 |
| sugar or nucleoside kinase, ribokinase family | SAMN05444682_102504 | Not Available | Negative | 1535075 - 1536139 | 39436.1 |
| predicted dehydrogenase | SAMN05444682_102505 | Not Available | Negative | 1536143 - 1537228 | 40561.4 |
| fructose-bisphosphate aldolase class ia, dhna family | SAMN05444682_102506 | Not Available | Negative | 1537279 - 1538109 | 30453.8 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05444682_102507 | Not Available | Negative | 1538165 - 1538923 | 28422.3 |
| glucosamine-6-phosphate deaminase | SAMN05444682_102508 | Not Available | Negative | 1538944 - 1539876 | 35122.5 |
| predicted dehydrogenase | SAMN05444682_102509 | Not Available | Negative | 1539887 - 1540969 | 39684.1 |
| protein of unknown function | SAMN05444682_102510 | Not Available | Negative | 1541033 - 1541635 | 22418.8 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05444682_102511 | Not Available | Negative | 1541654 - 1542655 | 37820.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
