Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein b | SAMN05444682_102492 | Not Available | Positive | 1519015 - 1519674 | 24364.6 |
| heme exporter protein c | SAMN05444682_102493 | Not Available | Positive | 1519740 - 1520408 | 25300.3 |
| hypothetical protein | SAMN05444682_102494 | Not Available | Positive | 1520476 - 1520694 | 7896.1 |
| glutamate dehydrogenase (nad(p)+) | SAMN05444682_102495 | Not Available | Positive | 1520737 - 1522173 | 52120.7 |
| pas domain s-box-containing protein | SAMN05444682_102496 | Not Available | Positive | 1522345 - 1525035 | 102532.0 |
| response regulator receiver domain-containing protein | SAMN05444682_102497 | Not Available | Positive | 1525040 - 1525447 | 15503.9 |
| fad/fmn-containing dehydrogenase | SAMN05444682_102498 | Not Available | Negative | 1525459 - 1528410 | 109343.0 |
| pyruvate carboxylase | SAMN05444682_102499 | Not Available | Negative | 1528447 - 1531887 | 126721.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444682_102500 | Not Available | Negative | 1531908 - 1532759 | 31496.5 |
| cytochrome c | SAMN05444682_102501 | Not Available | Negative | 1532913 - 1533347 | 15987.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
