Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-anti-sigma factor | SAMN05444682_102482 | Not Available | Positive | 1511144 - 1511527 | 13804.6 |
| ribonuclease z | SAMN05444682_102483 | Not Available | Positive | 1511524 - 1512435 | 34823.9 |
| histidinol phosphate aminotransferase apoenzyme | SAMN05444682_102484 | Not Available | Positive | 1512462 - 1513526 | 39485.1 |
| imidazoleglycerol-phosphate dehydratase | SAMN05444682_102485 | Not Available | Positive | 1513588 - 1514727 | 43050.2 |
| glutamine amidotransferase | SAMN05444682_102486 | Not Available | Positive | 1514778 - 1515371 | 21746.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05444682_102487 | Not Available | Positive | 1515390 - 1516139 | 27998.9 |
| cyclase | SAMN05444682_102488 | Not Available | Positive | 1516146 - 1516901 | 27438.7 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | SAMN05444682_102489 | Not Available | Positive | 1517016 - 1517609 | 22237.5 |
| wd-40 repeat-containing protein | SAMN05444682_102490 | Not Available | Positive | 1517625 - 1518542 | 34191.9 |
| hypothetical protein | SAMN05444682_102491 | Not Available | Positive | 1518629 - 1518979 | 12631.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
