Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| baat / acyl-coa thioester hydrolase c terminal | SAMN05444682_102472 | Not Available | Negative | 1498739 - 1501123 | 90149.1 |
| predicted dehydrogenase | SAMN05444682_102473 | Not Available | Negative | 1501159 - 1502148 | 35293.1 |
| bnr repeat-containing family member | SAMN05444682_102474 | Not Available | Negative | 1502176 - 1503558 | 52166.5 |
| transcriptional regulator, laci family | SAMN05444682_102475 | Not Available | Negative | 1503774 - 1504853 | 41100.0 |
| gaf domain-containing protein | SAMN05444682_102476 | Not Available | Positive | 1505258 - 1505752 | 18232.0 |
| abc transporter, permease/atp-binding protein | SAMN05444682_102477 | Not Available | Negative | 1505720 - 1507549 | 67237.8 |
| hypothetical protein | SAMN05444682_102478 | Not Available | Negative | 1507605 - 1508165 | 21351.9 |
| hypothetical protein | SAMN05444682_102479 | Not Available | Negative | 1508180 - 1509004 | 30437.7 |
| phosphate starvation-inducible protein phoh | SAMN05444682_102480 | Not Available | Positive | 1509169 - 1510116 | 35146.0 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05444682_102481 | Not Available | Positive | 1510168 - 1511133 | 36396.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
