Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | SAMN05444682_102462 | Not Available | Negative | 1483266 - 1484420 | 43611.1 |
| predicted dehydrogenase | SAMN05444682_102463 | Not Available | Negative | 1484479 - 1485444 | 33918.7 |
| arylsulfatase a | SAMN05444682_102464 | Not Available | Negative | 1485709 - 1487142 | 53398.8 |
| arylsulfatase a | SAMN05444682_102465 | Not Available | Negative | 1487164 - 1488579 | 52886.8 |
| arylsulfatase a | SAMN05444682_102466 | Not Available | Negative | 1488599 - 1490038 | 54087.2 |
| arylsulfatase a | SAMN05444682_102467 | Not Available | Negative | 1490047 - 1491546 | 55767.1 |
| starch-binding associating with outer membrane | SAMN05444682_102468 | Not Available | Negative | 1491598 - 1493340 | 65913.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102469 | Not Available | Negative | 1493374 - 1496784 | 128371.0 |
| fecr family protein | SAMN05444682_102470 | Not Available | Negative | 1496932 - 1498080 | 42753.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102471 | Not Available | Negative | 1498119 - 1498718 | 23697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
