Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444682_102452 | Not Available | Negative | 1468396 - 1469880 | 54958.4 |
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN05444682_102453 | Not Available | Negative | 1469883 - 1471016 | 41667.0 |
| enolase c-terminal domain-like | SAMN05444682_102454 | Not Available | Negative | 1471025 - 1472311 | 48234.4 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | SAMN05444682_102455 | Not Available | Negative | 1472324 - 1473388 | 39215.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444682_102456 | Not Available | Negative | 1473392 - 1474414 | 37536.9 |
| mn2+ and fe2+ transporters of the nramp family | SAMN05444682_102457 | Not Available | Negative | 1474429 - 1475631 | 42641.9 |
| starch-binding associating with outer membrane | SAMN05444682_102458 | Not Available | Negative | 1475821 - 1477539 | 65092.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102459 | Not Available | Negative | 1477564 - 1481055 | 129240.0 |
| fecr family protein | SAMN05444682_102460 | Not Available | Negative | 1481150 - 1482304 | 43244.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102461 | Not Available | Negative | 1482423 - 1483037 | 24077.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
