Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_102432 | Not Available | Negative | 1437948 - 1439159 | 45578.7 |
| starch-binding associating with outer membrane | SAMN05444682_102433 | Not Available | Negative | 1439178 - 1441112 | 72802.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102434 | Not Available | Negative | 1441128 - 1444610 | 130453.0 |
| fecr family protein | SAMN05444682_102435 | Not Available | Negative | 1444748 - 1445917 | 43997.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102436 | Not Available | Negative | 1446013 - 1446543 | 20505.8 |
| predicted amidohydrolase | SAMN05444682_102437 | Not Available | Negative | 1446767 - 1448278 | 57444.6 |
| hypothetical protein | SAMN05444682_102438 | Not Available | Negative | 1448520 - 1448744 | 8214.27 |
| predicted arabinose efflux permease, mfs family | SAMN05444682_102439 | Not Available | Negative | 1448748 - 1450250 | 55049.3 |
| protein of unknown function | SAMN05444682_102440 | Not Available | Negative | 1450359 - 1451834 | 55008.7 |
| hypothetical protein | SAMN05444682_102441 | Not Available | Negative | 1451971 - 1453110 | 42589.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
