Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101107 | Not Available | Positive | 135064 - 135165 | 3625.5 |
| protein of unknown function | SAMN05444682_101108 | Not Available | Positive | 135254 - 135439 | 6668.79 |
| hypothetical protein | SAMN05444682_101109 | Not Available | Positive | 135446 - 135625 | 6802.1 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN05444682_101110 | Not Available | Negative | 135752 - 136150 | 14961.0 |
| transcriptional regulator, arac family | SAMN05444682_101111 | Not Available | Negative | 136258 - 137049 | 30034.2 |
| cytochrome c | SAMN05444682_101112 | Not Available | Negative | 137194 - 138171 | 35444.7 |
| two component transcriptional regulator, lyttr family | SAMN05444682_101113 | Not Available | Negative | 138310 - 139023 | 27570.7 |
| histidine kinase | SAMN05444682_101114 | Not Available | Negative | 139014 - 140186 | 45556.9 |
| polyisoprenoid-binding protein ycei | SAMN05444682_101115 | Not Available | Positive | 140406 - 141029 | 22528.2 |
| alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein | SAMN05444682_101116 | Not Available | Positive | 141303 - 141638 | 12408.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
