Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN05444682_102382 | Not Available | Negative | 1360323 - 1360871 | 20406.9 |
| protein sco1/2 | SAMN05444682_102383 | Not Available | Negative | 1360915 - 1361625 | 27212.8 |
| cytochrome c oxidase subunit iv | SAMN05444682_102384 | Not Available | Negative | 1361625 - 1362002 | 14419.0 |
| cytochrome c oxidase subunit 3 | SAMN05444682_102385 | Not Available | Negative | 1362026 - 1362754 | 27469.6 |
| cytochrome c oxidase subunit 3 | SAMN05444682_102386 | Not Available | Negative | 1362764 - 1363354 | 21873.4 |
| protoheme ix farnesyltransferase | SAMN05444682_102387 | Not Available | Negative | 1363351 - 1364343 | 36722.7 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05444682_102388 | Not Available | Negative | 1364366 - 1365418 | 39171.4 |
| cytochrome c oxidase subunit 1 | SAMN05444682_102389 | Not Available | Negative | 1365425 - 1367317 | 70918.1 |
| cytochrome c oxidase subunit 2 | SAMN05444682_102390 | Not Available | Negative | 1367350 - 1368699 | 50563.9 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 2 | SAMN05444682_102391 | Not Available | Negative | 1368736 - 1369971 | 46463.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
