Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMN05444682_102372 | Not Available | Negative | 1343962 - 1345296 | 49189.3 |
| hypothetical protein | SAMN05444682_102373 | Not Available | Negative | 1345398 - 1345856 | 18680.4 |
| dna mismatch repair protein muts | SAMN05444682_102374 | Not Available | Negative | 1345933 - 1348509 | 96451.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN05444682_102375 | Not Available | Positive | 1348726 - 1349460 | 28282.5 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_102376 | Not Available | Negative | 1349503 - 1352619 | 118365.0 |
| starch-binding associating with outer membrane | SAMN05444682_102377 | Not Available | Negative | 1352699 - 1354318 | 62244.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102378 | Not Available | Negative | 1354330 - 1357752 | 126644.0 |
| fecr family protein | SAMN05444682_102379 | Not Available | Negative | 1357889 - 1359046 | 43028.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102380 | Not Available | Negative | 1359126 - 1359725 | 22777.3 |
| hypothetical protein | SAMN05444682_102381 | Not Available | Negative | 1359826 - 1360281 | 17339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
