Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_102352 | Not Available | Positive | 1309634 - 1310824 | 45205.6 |
| hypothetical protein | SAMN05444682_102353 | Not Available | Positive | 1310848 - 1314558 | 139045.0 |
| all-trans-retinol 13,14-reductase | SAMN05444682_102354 | Not Available | Positive | 1314679 - 1316238 | 59108.5 |
| cupin-like domain-containing protein | SAMN05444682_102355 | Not Available | Positive | 1316225 - 1317100 | 34393.4 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05444682_102356 | Not Available | Negative | 1317443 - 1318321 | 31655.7 |
| delta-60 repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN05444682_102357 | Not Available | Negative | 1318386 - 1326428 | 274315.0 |
| two component transcriptional regulator, luxr family | SAMN05444682_102358 | Not Available | Negative | 1326511 - 1327155 | 24257.3 |
| two component transcriptional regulator, luxr family | SAMN05444682_102359 | Not Available | Negative | 1327472 - 1328116 | 24438.8 |
| two component transcriptional regulator, luxr family | SAMN05444682_102360 | Not Available | Negative | 1328495 - 1329124 | 23960.2 |
| hypothetical protein | SAMN05444682_102361 | Not Available | Negative | 1329248 - 1330000 | 29580.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
