Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | SAMN05444682_102342 | Not Available | Positive | 1302730 - 1303152 | 16114.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN05444682_102343 | Not Available | Positive | 1303149 - 1304276 | 40481.6 |
| hypothetical protein | SAMN05444682_102344 | Not Available | Positive | 1304281 - 1304901 | 23370.8 |
| acyl carrier protein | SAMN05444682_102345 | Not Available | Positive | 1304894 - 1305148 | 9411.27 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN05444682_102346 | Not Available | Positive | 1305145 - 1306359 | 43482.5 |
| beta-ketoacyl synthase, n-terminal domain | SAMN05444682_102347 | Not Available | Positive | 1306352 - 1307416 | 39025.8 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444682_102348 | Not Available | Positive | 1307413 - 1308111 | 26599.4 |
| outer membrane lipoprotein carrier protein | SAMN05444682_102349 | Not Available | Positive | 1308092 - 1308736 | 24378.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05444682_102350 | Not Available | Positive | 1308765 - 1309139 | 13907.8 |
| hypothetical protein | SAMN05444682_102351 | Not Available | Positive | 1309149 - 1309619 | 17945.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
