Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SAMN05444682_102332 | Not Available | Positive | 1295010 - 1295261 | 9466.04 |
| predicted acyltransferase, lplat superfamily | SAMN05444682_102333 | Not Available | Positive | 1295271 - 1296137 | 33618.6 |
| hypothetical protein | SAMN05444682_102334 | Not Available | Positive | 1296199 - 1297131 | 35966.4 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05444682_102335 | Not Available | Positive | 1297131 - 1298267 | 42147.5 |
| predicted 3-hydroxylacyl-acp dehydratase, hotdog domain | SAMN05444682_102336 | Not Available | Positive | 1298272 - 1298709 | 16344.0 |
| hypothetical protein | SAMN05444682_102337 | Not Available | Positive | 1298759 - 1299166 | 15272.5 |
| hypothetical protein | SAMN05444682_102338 | Not Available | Positive | 1299186 - 1299659 | 17867.6 |
| butirosin biosynthesis protein h, n-terminal | SAMN05444682_102339 | Not Available | Positive | 1299668 - 1300663 | 37858.1 |
| abc-2 type transport system atp-binding protein | SAMN05444682_102340 | Not Available | Positive | 1300699 - 1301451 | 27796.7 |
| abc-2 type transport system permease protein | SAMN05444682_102341 | Not Available | Positive | 1301444 - 1302733 | 47178.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
