Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_102322 | Not Available | Negative | 1282362 - 1284143 | 65563.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102323 | Not Available | Negative | 1284175 - 1287426 | 118418.0 |
| predicted arabinose efflux permease, mfs family | SAMN05444682_102324 | Not Available | Negative | 1287443 - 1288690 | 44981.3 |
| arac family transcriptional regulator, l-rhamnose operon regulatory protein rhas | SAMN05444682_102325 | Not Available | Negative | 1288837 - 1289862 | 39620.5 |
| hypothetical protein | SAMN05444682_102326 | Not Available | Positive | 1289938 - 1290135 | 7281.63 |
| hypothetical protein | SAMN05444682_102327 | Not Available | Positive | 1290220 - 1290321 | 3794.7 |
| histidine ammonia-lyase | SAMN05444682_102328 | Not Available | Positive | 1290358 - 1291890 | 56576.6 |
| wg containing repeat-containing protein | SAMN05444682_102329 | Not Available | Positive | 1291902 - 1293035 | 41541.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444682_102330 | Not Available | Positive | 1293035 - 1293775 | 26996.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN05444682_102331 | Not Available | Positive | 1293776 - 1294993 | 43681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
