Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted rna-binding protein, contains pua-like domain | SAMN05444682_102312 | Not Available | Negative | 1269997 - 1270416 | 16063.4 |
| gliding motility-associated protein gldc | SAMN05444682_102313 | Not Available | Negative | 1270455 - 1270805 | 13478.9 |
| hypothetical protein | SAMN05444682_102314 | Not Available | Negative | 1270908 - 1271156 | 9466.33 |
| atp-dependent rna helicase rhle | SAMN05444682_102315 | Not Available | Negative | 1271153 - 1272490 | 50072.8 |
| phenylacetate-coa ligase | SAMN05444682_102316 | Not Available | Negative | 1272566 - 1273867 | 48820.8 |
| acyl-coenzyme a:6-aminopenicillanic acid acyl-transferase | SAMN05444682_102317 | Not Available | Negative | 1273868 - 1275532 | 62535.8 |
| dehydrogenase (flavoprotein) | SAMN05444682_102318 | Not Available | Negative | 1275567 - 1276790 | 46220.9 |
| cytochrome c | SAMN05444682_102319 | Not Available | Negative | 1277006 - 1280422 | 126447.0 |
| sugar phosphate isomerase/epimerase | SAMN05444682_102320 | Not Available | Negative | 1280472 - 1281434 | 35897.2 |
| sugar phosphate isomerase/epimerase | SAMN05444682_102321 | Not Available | Negative | 1281470 - 1282315 | 31895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
