Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10197 | Not Available | Positive | 115031 - 115375 | 13568.5 |
| hypothetical protein | SAMN05444682_10198 | Not Available | Positive | 115708 - 116397 | 25688.4 |
| hypothetical protein | SAMN05444682_10199 | Not Available | Positive | 116536 - 116760 | 7899.63 |
| hypothetical protein | SAMN05444682_101100 | Not Available | Positive | 116750 - 116923 | 6238.8 |
| two component transcriptional regulator, luxr family | SAMN05444682_101101 | Not Available | Positive | 117220 - 117858 | 23891.1 |
| signal transduction histidine kinase | SAMN05444682_101102 | Not Available | Negative | 117826 - 120861 | 114149.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05444682_101103 | Not Available | Positive | 121198 - 131697 | 357445.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05444682_101104 | Not Available | Positive | 131733 - 132749 | 37611.9 |
| hypothetical protein | SAMN05444682_101105 | Not Available | Positive | 132768 - 133058 | 11086.4 |
| wd40-like beta propeller repeat | SAMN05444682_101106 | Not Available | Positive | 133142 - 135049 | 70248.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
