Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | SAMN05444682_102282 | Not Available | Negative | 1225907 - 1226908 | 37073.4 |
| predicted neuraminidase (sialidase) | SAMN05444682_102283 | Not Available | Negative | 1226920 - 1228107 | 44938.0 |
| starch-binding associating with outer membrane | SAMN05444682_102284 | Not Available | Negative | 1228119 - 1229909 | 67556.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102285 | Not Available | Negative | 1229896 - 1232967 | 114475.0 |
| transcriptional regulator, arac family | SAMN05444682_102286 | Not Available | Positive | 1233133 - 1234002 | 33688.7 |
| alpha-l-rhamnosidase | SAMN05444682_102287 | Not Available | Negative | 1234024 - 1236282 | 84351.2 |
| arylsulfatase a | SAMN05444682_102288 | Not Available | Negative | 1236380 - 1237921 | 56769.8 |
| arylsulfatase a | SAMN05444682_102289 | Not Available | Negative | 1237961 - 1239325 | 51178.9 |
| starch-binding associating with outer membrane | SAMN05444682_102290 | Not Available | Negative | 1239291 - 1240796 | 55632.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102291 | Not Available | Negative | 1240816 - 1244139 | 121674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
