Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102271 | Not Available | Negative | 1210920 - 1214267 | 121745.0 |
| fecr family protein | SAMN05444682_102273 | Not Available | Negative | 1214432 - 1215622 | 44308.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102274 | Not Available | Negative | 1215709 - 1216254 | 21164.3 |
| co-chaperonin groes (hsp10) | SAMN05444682_102275 | Not Available | Positive | 1216479 - 1216859 | 14365.3 |
| pyridine nucleotide-disulphide oxidoreductase | SAMN05444682_102276 | Not Available | Negative | 1216861 - 1217949 | 39691.0 |
| n-terminus of esterase_sgnh_hydro-type | SAMN05444682_102277 | Not Available | Negative | 1217939 - 1219027 | 39456.3 |
| sialate o-acetylesterase | SAMN05444682_102278 | Not Available | Negative | 1219058 - 1220524 | 54152.9 |
| alpha-l-rhamnosidase | SAMN05444682_102279 | Not Available | Negative | 1220651 - 1223890 | 120791.0 |
| mfs transporter, acs family, hexuronate transporter | SAMN05444682_102280 | Not Available | Negative | 1223981 - 1225255 | 47394.7 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05444682_102281 | Not Available | Negative | 1225252 - 1225920 | 23819.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
