Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_102261 | Not Available | Negative | 1197432 - 1199141 | 64208.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102262 | Not Available | Negative | 1199150 - 1202473 | 123331.0 |
| fecr family protein | SAMN05444682_102263 | Not Available | Negative | 1202515 - 1203636 | 42054.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102264 | Not Available | Negative | 1203697 - 1204215 | 19832.0 |
| merr hth family regulatory protein | SAMN05444682_102265 | Not Available | Negative | 1204320 - 1204604 | 10943.2 |
| curved dna-binding protein | SAMN05444682_102266 | Not Available | Negative | 1204619 - 1205518 | 33916.8 |
| protein of unknown function | SAMN05444682_102267 | Not Available | Positive | 1205749 - 1206327 | 19144.9 |
| hypothetical protein | SAMN05444682_102268 | Not Available | Negative | 1206332 - 1207402 | 39908.5 |
| fad dependent oxidoreductase | SAMN05444682_102269 | Not Available | Negative | 1207390 - 1209300 | 71294.7 |
| starch-binding associating with outer membrane | SAMN05444682_102270 | Not Available | Negative | 1209346 - 1210827 | 54970.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
