Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted glycoside hydrolase or deacetylase chbg, upf0249 family | SAMN05444682_102251 | Not Available | Negative | 1179530 - 1181125 | 58945.6 |
| protein of unknown function | SAMN05444682_102252 | Not Available | Negative | 1181133 - 1182467 | 49356.2 |
| starch-binding associating with outer membrane | SAMN05444682_102253 | Not Available | Negative | 1182482 - 1184056 | 57488.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102254 | Not Available | Negative | 1184098 - 1187715 | 134583.0 |
| fecr family protein | SAMN05444682_102255 | Not Available | Negative | 1187837 - 1189024 | 44622.9 |
| beta-galactosidase | SAMN05444682_102256 | Not Available | Negative | 1189117 - 1191336 | 83822.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102257 | Not Available | Negative | 1191439 - 1192020 | 23145.7 |
| fad dependent oxidoreductase | SAMN05444682_102258 | Not Available | Negative | 1192201 - 1193994 | 66684.0 |
| hypothetical protein | SAMN05444682_102259 | Not Available | Negative | 1193991 - 1194944 | 35869.7 |
| hypothetical protein | SAMN05444682_102260 | Not Available | Negative | 1194937 - 1197408 | 91599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
