Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-psicose/d-tagatose/l-ribulose 3-epimerase | SAMN05444682_102239 | Not Available | Negative | 1162830 - 1163681 | 31107.1 |
| trehalose utilisation | SAMN05444682_102240 | Not Available | Negative | 1163706 - 1164722 | 36686.2 |
| protein of unknown function | SAMN05444682_102241 | Not Available | Negative | 1164864 - 1165928 | 38481.9 |
| putative heme-binding domain-containing protein | SAMN05444682_102242 | Not Available | Negative | 1165938 - 1168631 | 100416.0 |
| hypothetical protein | SAMN05444682_102244 | Not Available | Negative | 1168980 - 1169546 | 21670.2 |
| starch-binding associating with outer membrane | SAMN05444682_102246 | Not Available | Negative | 1169572 - 1171056 | 55817.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_102247 | Not Available | Negative | 1171083 - 1174487 | 124626.0 |
| fecr family protein | SAMN05444682_102248 | Not Available | Negative | 1174608 - 1175834 | 45228.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_102249 | Not Available | Negative | 1175895 - 1176458 | 22016.5 |
| alpha-l-rhamnosidase | SAMN05444682_102250 | Not Available | Negative | 1176637 - 1179444 | 105982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
